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nTracer is an image processing plugin for ImageJ/Fiji which allows
Please cite:
Multispectral tracing in densely labeled mouse brain with nTracer.
Roossien DH, Sadis BV*, Yan Y*, Webb JM*, Min LY, Dizaji AS, Bogart LJ, Mazuski C, Huth RS, Stecher JS, Akula S, Shen F, Xiao T, Vandenbrink M, Lichtman JW, Hensch TK, Herzog ED, Cai D Bioinformatics 2019;btz084
The distribution of Brainbow and nTracer is partially supported by an NSF grant. Please register as a user and acknowledge "NSF-1707316 NeuroNex MINT" in your future publications that use Brainbow and nTracer.
The distribution of Brainbow and nTracer is partially supported by an NSF grant. Please register as a user and acknowledge "NSF-1707316 NeuroNex MINT" in your future publications that use Brainbow and nTracer.
March 12, 2020: nTracer1.3.5 Changelog
March 12, 2020: nTracer1.3.5 Changelog
Buffered virtual stack implementation (allows 200Gb image to be opened on <8Gb of memory)
Support for ROI manager in nTracer views
Backend performance improvements in trace rendering and maximum projection (traces load x10 faster)
Support for visualization of imported ROIs
Download Links
Download Links
nTracer Supplemental Training Videos
nTracer Supplemental Training Videos
Tracing Somas
Tracing Somas
Tracing Neuronal Spines
Tracing Neuronal Spines
Tracing Neurites
Tracing Neurites
Identifying Synapses
Identifying Synapses
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